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Table of Contents
Multiple Sites or Applications in IIS
Application Pools and Shared Configurations
Custom Logging Paths in Web.config or Code
Home Topics IIS Why is IIS logging to two different folders?

Why is IIS logging to two different folders?

Jul 28, 2025 am 12:30 AM

The reasons and solutions for recording IIS logs to two different folders are as follows: 1. Multiple sites or applications have individual log paths configured, which can be set uniformly in the IIS manager; 2. The paths are inconsistent due to application pool identity permissions or shared configurations, and the paths need to be standardized and the permissions are checked; 3. Custom log paths in code or web.config, and the log settings in the configuration file and code are checked. Verifying the above configuration can solve the problem of log dispersion.

Why is IIS logging to two different folders?

If you're seeing IIS (Internet Information Services) logging to two different folders, it's not a bug — it's usually due to how IIS is configured. This behavior often catches admins off guard, especially when troubleshooting or setting up log collection systems. Here's why it might be happening and what you can do about it.

Why is IIS logging to two different folders?

Multiple Sites or Applications in IIS

One of the most common reasons IIS logs go to different folders is that you're running multiple websites or applications under the same server. Each site or application in IIS can have its own logging path configured independently.

  • For example, if you have a main site ( Default Web Site ) and an API hosted under a separate application ( /api ), each can be configured to write logs to different folders.
  • You can check this by opening IIS Manager, selecting each site or app, and looking at the Logging feature.

To fix or standardize this:

Why is IIS logging to two different folders?
  • Go to each site/application in IIS Manager
  • Double-click "Logging"
  • Set the same directory path under "Log file name" if you want logs in one place
  • Make sure the application pool identity has write access to that folder

Application Pools and Shared Configurations

Another possible cause is the use of shared configurations or multiple application pools . If you're using shared configuration (like in a web farm), or if multiple application pools are involved, the logging paths might not be consistent unless explicitly configured.

  • Application pools can affect how and where logs are written, especially if the identity running the pool doesn't have permissions to the desired log folder.
  • Also, if you're using a shared configuration across multiple servers, each server might be writing logs locally to its own folder.

To avoid confusion:

Why is IIS logging to two different folders?
  • Standardize the logging path across all servers/sites
  • Use UNC paths if centralized logging is the goal
  • Check permissions on the log folder for the application pool identity

Custom Logging Paths in Web.config or Code

Sometimes the reason is not visible in IIS Manager at all — it might be set programmatically or through configuration files like web.config .

  • If your application uses custom HTTP modules or middleware (eg, in ASP.NET Core), logging behavior can be overridden in code.
  • Also, some third-party modules or frameworks might change the logging destination dynamically.

To investigate:

  • Look for any logging-related configuration in web.config
  • Search for references to logFile or logging in code or configuration files
  • If using ASP.NET Core, check Program.cs or Startup.cs for logging setup

In short, IIS logs going to two different folders usually come down to how sites, applications, or configurations are set up. Once you look at each site's logging settings and check for custom or programmatic overrides, you'll usually find the cause.

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